Detailed information of matrix profile UN1003.1

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Profile summary

Name: ATOH1::TBX21
Matrix ID: UN1003.1
Class: Basic helix-loop-helix factors (bHLH)::T-Box factors
Family: Tal-related::TBrain-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: Q92858   Q9UL17  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 720 69 1610 8 1188 62 5 32 6 261 1027 3 1683 42 208 146 ]
C [ 703 1717 11 180 546 70 19 146 103 1147 109 1779 6 1714 1160 215 ]
G [ 322 9 73 345 73 8 1754 266 14 296 373 18 109 42 278 76 ]
T [ 64 14 115 1276 2 1669 31 1365 1686 105 300 9 11 11 163 1372 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1003.1 UN1003 1 ATOH1::TBX21 Homo sapiens
Tal-related::TBrain-related factors Basic helix-loop-helix factors (bHLH)::T-Box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: