Detailed information of matrix profile UN1003.1

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Profile summary

Name: ATOH1::TBX21
Matrix ID: UN1003.1
Class: Basic helix-loop-helix factors (bHLH)::T-Box factors
Family: Tal-related::TBrain-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: Q92858   Q9UL17  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 1372 163 11 11 9 300 105 1686 1365 31 1669 2 1276 115 14 64 ]
C [ 76 278 42 109 18 373 296 14 266 1754 8 73 345 73 9 322 ]
G [ 215 1160 1714 6 1779 109 1147 103 146 19 70 546 180 11 1717 703 ]
T [ 146 208 42 1683 3 1027 261 6 32 5 62 1188 8 1610 69 720 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1003.1 UN1003 1 ATOH1::TBX21 Homo sapiens
Tal-related::TBrain-related factors Basic helix-loop-helix factors (bHLH)::T-Box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: