Detailed information of matrix profile UN0980.1

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Profile summary

Name: ETV1::IRF8
Matrix ID: UN0980.1
Class: Tryptophan cluster factors
Family: Ets-related::Interferon-regulatory factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: P50549   Q02556  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 651 75 391 103 93 25 98 22 64 290 14 7 628 106 41 136 42 42 272 ]
C [ 141 772 47 57 1039 1197 25 155 6 39 39 1225 21 306 23 81 102 1190 121 ]
G [ 457 128 75 66 68 52 1126 1089 5 29 129 16 659 784 21 11 56 22 799 ]
T [ 73 347 809 1096 122 48 73 56 1247 964 1140 74 14 126 1237 1094 1122 68 130 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0980.1 UN0980 1 ETV1::IRF8 Homo sapiens
Ets-related::Interferon-regulatory factors Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: