Detailed information of matrix profile UN0924.1

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Profile summary

Name: VSX2::TCF12
Matrix ID: UN0924.1
Class: Homeo domain factors::Basic helix-loop-helix factors (bHLH)
Family: Paired-related HD factors::E2A
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: P58304   Q99081  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 5 248 6 14 4 7 20 77 78 50 18 145 213 16 19 193 ]
C [ 245 5 16 46 6 2 75 42 65 81 109 52 6 11 23 9 ]
G [ 10 4 241 202 2 252 57 94 64 48 17 40 30 25 23 43 ]
T [ 7 10 4 5 255 6 115 54 60 88 123 30 18 215 202 22 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0924.1 UN0924 1 VSX2::TCF12 Homo sapiens
Paired-related HD factors::E2A Homeo domain factors::Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: