Detailed information of matrix profile UN0921.1

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Profile summary

Name: CREM::GABPA
Matrix ID: UN0921.1
Class: Basic leucine zipper factors (bZIP)::Tryptophan cluster factors
Family: CREB-related factors::Ets-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: Q03060   Q06546  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 1180 56 180 79 209 1909 1 353 73 48 16 31 49 ]
C [ 95 1669 77 143 1601 7 1352 26 22 1866 1910 56 358 ]
G [ 488 56 1627 65 80 33 36 63 37 27 21 1624 1262 ]
T [ 196 178 75 1672 69 10 570 1517 1827 18 12 248 290 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0921.1 UN0921 1 CREM::GABPA Homo sapiens
CREB-related factors::Ets-related Basic leucine zipper factors (bZIP)::Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: