Detailed information of matrix profile UN0899.1

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Profile summary

Name: HOXA10::TGIF2LX
Matrix ID: UN0899.1
Class: Homeo domain factors
Family: HOX::TALE-type homeo domain factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: P31260   Q8IUE1  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 46 45 571 33 504 28 170 23 39 193 682 46 29 379 ]
C [ 59 18 19 608 31 115 71 7 9 10 15 250 25 30 ]
G [ 57 644 70 28 151 384 168 34 29 38 18 24 444 232 ]
T [ 554 9 56 47 30 189 307 652 639 475 1 396 218 75 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0899.1 UN0899 1 HOXA10::TGIF2LX Homo sapiens
HOX::TALE-type homeo domain factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: