Detailed information of matrix profile UN0897.1

  1. Home
  2. Matrix > UN0897.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: HES5::TEAD4
Matrix ID: UN0897.1
Class: Basic helix-loop-helix factors (bHLH)::TEA domain factors
Family: Hairy-related factors::TEF-1-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: Q5TA89   Q15561  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 67 41 143 1 8 8 38 12 36 63 70 49 100 61 202 7 66 5 9 ]
C [ 30 149 13 164 3 59 32 103 99 67 62 82 11 146 1 3 1 198 159 ]
G [ 120 5 54 5 205 2 130 47 41 56 34 53 99 15 19 4 27 11 2 ]
T [ 6 28 13 53 7 154 23 61 47 37 57 39 13 1 1 209 129 9 53 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0897.1 UN0897 1 HES5::TEAD4 Homo sapiens
Hairy-related factors::TEF-1-related factors Basic helix-loop-helix factors (bHLH)::TEA domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: