Detailed information of matrix profile MA2733.1

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Profile summary
Name: Sl-ERF_F_4
Matrix ID: MA2733.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Solanum lycopersicum
Data Type: DAP-seq
Validation: 27203113
Uniprot ID: A0A3Q7HF92  
Source: GSE172260
Comment: Validated by inference and motif similarity with RAP2-6

Sequence logo

Frequency matrix

         
A [ 54 27 214 18 20 30 10 17 45 13 17 28 33 50 61 23 50 47 51 ]
C [ 155 20 38 384 10 21 421 12 20 409 14 12 386 22 13 375 25 35 301 ]
G [ 29 373 183 10 398 393 1 390 383 8 368 405 14 191 368 24 174 348 50 ]
T [ 225 43 28 51 35 19 31 44 15 33 64 18 30 200 21 41 214 33 61 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2733.1 MA2733 1 Sl-ERF_F_4 Solanum lycopersicum
ERF/DREB AP2/EREBP
     

-log(P-value) = 0.0

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