Detailed information of matrix profile MA2718.1

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Profile summary
Name: Sl-ERF_A_3
Matrix ID: MA2718.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Solanum lycopersicum
Data Type: DAP-seq
Validation: 27203113
Uniprot ID: Q8LGR9  
Source: GSE172249
Comment: Validated by inference and motif similarity with RAP2-6

Sequence logo

Frequency matrix

         
A [ 47 66 85 25 17 24 3 1 12 2 2 37 15 46 118 51 60 ]
C [ 230 255 23 250 360 1 356 386 0 377 383 0 326 269 17 226 212 ]
G [ 57 20 219 55 2 330 25 1 374 4 0 340 13 15 196 36 23 ]
T [ 56 49 63 60 11 35 6 2 4 7 5 13 36 60 59 77 95 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2718.1 MA2718 1 Sl-ERF_A_3 Solanum lycopersicum
ERF/DREB AP2/EREBP
     

-log(P-value) = 3.1e-44

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