Detailed information of matrix profile MA2694.1

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Profile summary
Name: sak1
Matrix ID: MA2694.1
Class: Fork head/winged helix factors
Family: RFX-related factors
Collection: CORE
Taxon: Fungi
Species: Schizosaccharomyces pombe
Data Type: ChIP-seq
Validation: 25908789
Uniprot ID: P48383  
Source: 40015273
Comment:

Sequence logo

Frequency matrix

         
A [ 1 0 0 0 0 2 0 21 1 3 10 1 21 23 ]
C [ 7 0 0 0 0 11 15 2 3 1 1 19 0 0 ]
G [ 15 23 0 0 22 0 0 0 2 19 12 0 2 0 ]
T [ 0 0 23 23 1 10 8 0 17 0 0 3 0 0 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2694.1 MA2694 1 sak1 Schizosaccharomyces pombe
RFX-related factors Fork head/winged helix factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: