Detailed information of matrix profile MA2645.1

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Profile summary
Name: GLYMA-16G042900
Matrix ID: MA2645.1
Class: GCM domain factors
Family: NAC
Collection: CORE
Taxon: Plants
Species: Glycine max
Data Type: DAP-seq
Validation: 27203113
Uniprot ID: A0A0R0FU94  
Source: 39695844
Comment: Validated by inference and motif similarity with NAC087 (MA1791)

Sequence logo

Frequency matrix

         
A [ 28 33 17 38 48 15 1 0 36 40 47 66 73 255 6 332 274 3 22 152 278 ]
C [ 12 19 4 1 11 335 0 0 120 99 35 157 143 12 171 1 61 1 117 54 4 ]
G [ 280 277 2 40 283 0 175 0 189 7 52 69 39 39 124 4 7 339 28 7 9 ]
T [ 31 22 328 272 9 1 175 351 6 205 217 59 96 45 50 14 9 8 184 138 60 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2645.1 MA2645 1 GLYMA-16G042900 Glycine max
NAC GCM domain factors
     

-log(P-value) = 0.0

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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