JASPAR CORE

  1. Home
  2. Collection core

Total 4572 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0098.3 ETS1 Homo sapiens Tryptophan cluster factors Ets-related
MA0098.4 ETS1 Homo sapiens Tryptophan cluster factors Ets-related
MA0099.1 Fos::Jun Mus musculus Basic leucine zipper factors (bZIP) Fos-related::Jun-related
MA0099.2 FOS::JUN Homo sapiens Mus musculus Rattus norvegicus Basic leucine zipper factors (bZIP) Fos-related::Jun-related
MA0099.3 FOS::JUN Homo sapiens Basic leucine zipper factors (bZIP) Fos-related::Jun-related
MA0099.4 FOS::JUN Homo sapiens Basic leucine zipper factors (bZIP) Fos-related::Jun-related
MA0100.1 Myb Mus musculus Tryptophan cluster factors Myb/SANT domain factors
MA0100.2 Myb Mus musculus Tryptophan cluster factors Myb/SANT domain factors
MA0100.3 MYB Homo sapiens Tryptophan cluster factors Myb/SANT domain factors
MA0100.4 MYB Homo sapiens Tryptophan cluster factors Myb/SANT domain factors
Showing 10 profiles of page 26 from 458 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.

Add to cart

You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.
View cart

Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

inMOTIFin

Input a (FASTA-formatted) sequence or simulate one to insert the selected matrix models.




Probability of the letters in the background alphabet (ACGT). Note: probabilities should sum to 1.


Download

Download the PFMs of the model(s) selected in four different formats.