JASPAR CORE

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Total 4572 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA2661.1 GLYMA-03G081700 NA Basic leucine zipper factors (bZIP) bZIP
MA2662.1 GLYMA-13G153200 NA Basic leucine zipper factors (bZIP) group A
MA2663.1 GLYMA-02G261700 NA AP2/EREBP
MA2664.1 GLYMA-03G162700 NA AP2/EREBP ERF/DREB
MA2665.1 GLYMA-11G053600 NA AP2/EREBP ERF/DREB
MA2666.1 GLYMA-12G117000 NA AP2/EREBP ERF/DREB
MA2667.1 GLYMA-13G236500 NA AP2/EREBP ERF/DREB
MA2668.1 GLYMA-20G155100 NA AP2/EREBP ERF/DREB
MA2669.1 GLYMA-04G231400 NA Homeo domain factors HD-ZIP
MA2670.1 GLYMA-15G168800 NA Homeo domain factors HD-ZIP
Showing 10 profiles of page 448 from 458 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

inMOTIFin

Input a (FASTA-formatted) sequence or simulate one to insert the selected matrix models.




Probability of the letters in the background alphabet (ACGT). Note: probabilities should sum to 1.


Download

Download the PFMs of the model(s) selected in four different formats.