JASPAR CORE

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Total 4572 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0769.3 TCF7 NA High-mobility group (HMG) domain factors TCF-7-related factors
MA0770.1 HSF2 NA Heat shock factors HSF factors
MA0771.1 HSF4 NA Heat shock factors HSF factors
MA0772.1 IRF7 NA Tryptophan cluster factors Interferon-regulatory factors
MA0772.2 IRF7 NA Tryptophan cluster factors Interferon-regulatory factors
MA0773.1 MEF2D NA MADS box factors Regulators of differentiation
MA0774.1 MEIS2 NA Homeo domain factors TALE-type homeo domain factors
MA0775.1 MEIS3 NA Homeo domain factors TALE-type homeo domain factors
MA0775.2 MEIS3 NA Homeo domain factors TALE-type homeo domain factors
MA0776.1 MYBL1 NA Tryptophan cluster factors Myb/SANT domain factors
Showing 10 profiles of page 155 from 458 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

inMOTIFin

Input a (FASTA-formatted) sequence or simulate one to insert the selected matrix models.




Probability of the letters in the background alphabet (ACGT). Note: probabilities should sum to 1.


Download

Download the PFMs of the model(s) selected in four different formats.